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abnA

arabinan-endo 1,5-alpha-L-arabinase
geneabnA
locus (old tag)RBAM_RS12890 (RBAM_025870)
feature typeCDS_with protein
productWP_012118149.1; arabinan endo-1,5-alpha-L-arabinosidase
synonyms
homologBSU28810
start2712571
stop2713536
direction-
length966
essentialno
protein detection in LByes
Genomic Context

Functional category containing this gene/protein

Category2. Metabolism
Subcategory12.2. Carbon metabolism
Subcategory22.2.2. Utilization of specific carbon sources
Subcategory32.2.2.6. Utilization of arabinan/ arabinose/ arabi

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings, secretion stimulated by root exudate

Expression and Regulation

Operons
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Structure
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Kierul K, Voigt B, Albrecht D, Chen XH, Carvalhai

Influence of root exudates on the extracellular proteome of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42.

Microbiology. 2015 Jan;161(Pt 1):131-47. doi: 10.1099/mic.0.083576-0. Epub 2014 Oct 29;PMID:25355936

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21