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abnA

arabinan-endo 1,5-alpha-L-arabinase
geneabnA
productarabinan-endo 1,5-alpha-L-arabinase
locusRBAM_025870
synonyms
homologBSU28810
start2712571
stop2713536
direction-
length966
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

Category2. Metabolism
Subcategory12.2. Carbon metabolism
Subcategory22.2.2. Utilization of specific carbon sources
Subcategory32.2.2.6. Utilization of arabinan/ arabinose/ arabi

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings, secretion stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU28810
Transcripts
Primary TSS2713732
Secondary TSS2713597
Internal TSS2712706
Antisense TSS

Sigma factors

SigA

Protein regulator

AraR repression CcpA repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
3.2.1.99
Protein family
Domains
Effectors of protein activity
Refer to BSU28810
Structure
Refer to BSU28810
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4.4.3.2.1 stimulation by root exudate 4.4.3.2 proteomics 4.4.3 Response to plants 4. 4 Interaction with plants and growth competitors 4. Lifestyles

References


Kierul K, Voigt B, Albrecht D, Chen XH, Carvalhai

Influence of root exudates on the extracellular proteome of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42.

Microbiology. 2015 Jan;161(Pt 1):131-47. doi: 10.1099/mic.0.083576-0. Epub 2014 Oct 29;PMID:25355936

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21