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abrB

transcriptional regulator for transition state genes
geneabrB
producttranscriptional regulator for transition state genes
locusRBAM_000460
synonymscpsX
homologBSU00370
start45611
stop45895
direction-
length285
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transition state regulators
Subcategory3regulation of gene expression during transition

Phenotypes of a mutant

plant-bacteria interaction

"plant growth promotion, root colonisation"

Expression and Regulation

Operons
Refer to BSU00370
Transcripts
Primary TSS45970
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

SigA

Protein regulator

AbrB repression Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

Spo0A Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU00370
Structure
Refer to BSU00370
Modification
K2
Acetylation
"K2,71"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Neubauer S, Dolgova O, Pr?g G, Borriss R, Makarew

Substitutional analysis of the C-terminal domain of AbrB revealed its essential role in DNA-binding activity.

PLoS One. 2014 May 15;9(5):e97254. doi: 10.1371/journal.pone.0097254.;PMID:24832089

Dietel K, Beator B, Budiharjo A, Fan B, Borriss R

Bacterial Traits Involved in Colonization of Arabidopsis thaliana Roots by Bacillus amyloliquefaciens FZB42.

Plant Pathol J. 2013 Mar;29(1):59-66. doi: 10.5423/PPJ.OA.10.2012.0155;PMID:25288929

Weng J, Wang Y, Li J, Shen Q, Zhang R.

Enhanced root colonization and biocontrol activity of Bacillus amyloliquefaciens SQR9 by abrB gene disruption.

Appl Microbiol Biotechnol. 2013 Oct;97(19):8823-30. doi: 10.1007/s00253-012-4572-4. Epub 2012 Nov 30.;PMID:23196984

Neubauer S, Borriss R, Makarewicz O

Thermodynamic and molecular analysis of the AbrB-binding sites within the phyC-region of Bacillus amyloliquefaciens FZB45.

Mol Genet Genomics. 2012 Feb;287(2):111-22. doi: 10.1007/s00438-011-0666-4. Epub 2011 Dec 20.;PMID:22183144

Makarewicz O, Neubauer S, Preusse C, Borriss R

Transition state regulator AbrB inhibits transcription of Bacillus amyloliquefaciens FZB45 phytase through binding at two distinct sites located within the extended phyC promoter region.

J Bacteriol. 2008 Oct;190(19):6467-74. doi: 10.1128/JB.00430-08. Epub 2008 Aug 1;PMID:18676675