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argF

ornithine carbamoyltransferase
geneargF
productornithine carbamoyltransferase
locusRBAM_011250
synonyms
homologBSU11250
start1104359
stop1105330
direction+
length972
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryMetabolism
Subcategory1amino acid/ nitrogen metabolism
Subcategory2biosynthesis/ acquisition of amino acids
Subcategory3biosynthesis/ acquisition of arginine

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by root exudate

Expression and Regulation

Operons
argC-argJ-argB-argD-carA-carB-
Transcripts
Primary TSS
Secondary TSS
Internal TSS1104583
Antisense TSS

Sigma factors

SigA

Protein regulator

AhrC repression CodY repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
2.1.3.3
Protein family
Domains
Effectors of protein activity
Refer to BSU11250
Structure
Refer to BSU11250
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.3 suppression by root exudate

References


Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735