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bkdB

2-oxo acid dehydrogenase subunit E2
genebkdB
locusRBAM_022310
feature typeCDS
productABS74592.1 2-oxo acid dehydrogenase subunit E2
synonyms
homologBSU24030
start2367243
stop2368505
direction-
length1263
essential
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1amino acid/ nitrogen metabolism
Subcategory2utilization of amino acids
Subcategory3utilization of branched-chain amino acids

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ptb-bcd-buk-lpdV-bkdAA-bkdAB-b
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

SigL

Protein regulator

BkdR activation CodY repression CodY indirect regulation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigL Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU24030
Structure
Refer to BSU24030
Malonylation
K318
Acetylation
K307
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42.

PLoS One. 2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002. eCollection 2015. PMID: 26540162