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carD

CarD family transcriptional regulator
genecarD
locusRBAM_005410
feature type4. 4 Interaction with plants and growth
product4.4.3.1 transcriptomics
synonyms
homologBSU05130
start522289
stop522750
direction-
length462
essentialno
protein detected in LB4.4.3 Response to plants
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transcription factors and their control
Subcategory3transcription factor/ other/ based on similarity

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU05130
Transcripts
Primary TSS522776
Secondary TSS522811
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU05130
Structure
Refer to BSU05130
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
"4. Lifestyles

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735