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colA

GXT repeat-containing collagen-like protein
genecolA
locus (old tag)RBAM_RS03870 (RBAM_007740)
feature typeCDS_with protein
productWP_012117055.1; hypothetical protein
synonymsclpA
homolog
start763771
stop764457
direction+
length687
essential
protein detection in LBnot detected
Genomic Context

Functional category containing this gene/protein

Category4. Lifestyles
Subcategory14. 4 Interaction with plants and growth competitor
Subcategory24.4.1 motility and colonization of plant surfaces
Subcategory34.4.1.1 colonization of roots

Phenotypes of a mutant

plant-bacteria interaction

adhesion to root surface and biofilm formation

Expression and Regulation

Operons
Transcripts
Primary TSS763758
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Structure
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
no ortholog in B. subtilis 168

References


Zhao, X., Wang, Y., Shang, Q., et al.

Collagen-Like Proteins (ClpA, ClpB, ClpC,and ClpD) are required for biofilm formation and adhesion to plant roots by Bacillus amyloliquefaciens FZB42.

PLoS One 10, e0117414. 2015