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defB

peptide deformylase
genedefB
locusRBAM_014300
feature typeCDS
productABS73793.1 peptide deformylase
synonymsykrB
homologBSU14560
start1389647
stop1390201
direction-
length555
essentialno
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1"protein synthesis, modification and degradation"
Subcategory2translation
Subcategory3translation/ other

Phenotypes of a mutant

plant-bacteria interaction

Expression and Regulation

Operons
Refer to BSU14560
Transcripts
Primary TSS1390222
Secondary TSS
Internal TSS
Antisense TSS1390234

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
3.5.1.88
Protein family
https://enzyme.expas
Domains
Effectors of protein activity
Refer to BSU14560
Structure
Refer to BSU14560
Malonylation
K130
Acetylation
K52
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828