Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


degR

hypothetical protein
genedegR
locusRBAM_020080
feature typeCDS
productABS74370.1 hypothetical protein
synonymsprtR
homologBSU21940
start2113792
stop2113974
direction-
length183
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transcription factors and their control
Subcategory3control of two-component response regulators

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU21940
Transcripts
Primary TSS2113987
Secondary TSS2114038
Internal TSS
Antisense TSS

Sigma factors

SigD

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigD Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU21940
Structure
Refer to BSU21940
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735