| gene | degU |
| locus | RBAM_032640 |
| feature type | CDS |
| product | ABS75594.1 response regulator transcription factor |
| synonyms | |
| homolog | BSU35490 |
| start | 3379818 |
| stop | 3380507 |
| direction | - |
| length | 690 |
| essential | |
| protein detected in LB | yes |
Functional category containing this gene/protein
| Category | Information processing |
| Subcategory1 | regulation of gene expression |
| Subcategory2 | transcription factors and their control |
| Subcategory3 | two-component system response regulators |
Phenotypes of a mutant
plant-bacteria interaction
| "root colonization, control of plant pathogens, 4. Lifestyles, 4.1. Exponential and early post-exponential lifestyles, 4.1.2. Biofilm formation, 4.1.2.4. Regulation" |
Expression and Regulation
| Primary TSS | |
| Secondary TSS | |
| Internal TSS | |
| Antisense TSS |
Sigma factors
Protein regulator
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
Biological materials
References
Liu L, Wang G, Song L, Lv B, Liang W
Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828Xu Z, Zhang R, Wang D, Qiu M, Feng H, Zhang N, Sh
Appl Environ Microbiol. 2014 May;80(9):2941-50. doi: 10.1128/AEM.03943-13. Epub 2014 Feb 28.;PMID:24584252Dietel K, Beator B, Budiharjo A, Fan B, Borriss R
Plant Pathol J. 2013 Mar;29(1):59-66. doi: 10.5423/PPJ.OA.10.2012.0155;PMID:25288929Mariappan A, Makarewicz O, Chen XH, Borriss R.
J Mol Microbiol Biotechnol. 2012;22(2):114-25. doi: 10.1159/000338804. Epub 2012 Jun 7;PMID:22677979Scholz R, Molohon KJ, Nachtigall J, Vater J, Mark
J Bacteriol. 2011 Jan;193(1):215-24. doi: 10.1128/JB.00784-10. Epub 2010 Oct 22;PMID:20971906Koumoutsi A, Chen XH, Vater J, Borriss R.
Appl Environ Microbiol. 2007 Nov;73(21):6953-64. Epub 2007 Sep 7.;PMID:17827323