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dfnF

modular polyketide synthase of type I involved in difficidin synthesis DfnF
genedfnF
locusRBAM_022010
feature typeCDS
productABS74562.1 SDR family NAD(P)-dependent oxidoreductase
synonyms
homolog
start2315870
stop2321596
direction-
length5727
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1Additional metabolic pathways
Subcategory2Miscellaneous metabolic pathwa
Subcategory3Nonribosomal synthesis of antibacterial p

Phenotypes of a mutant

plant-bacteria interaction

"control of plant pathogens, transcription stimulated by root exudate"

Expression and Regulation

Operons
Transcripts
Primary TSS
Secondary TSS
Internal TSS2316532
Antisense TSS2317823

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Structure
Malonylation
Acetylation
K15
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Wu L, Wu H, Chen L, Yu X, Borriss R, Gao X.

Difficidin and bacilysin from Bacillus amyloliquefaciens FZB42 have antibacterial activity against Xanthomonas oryzae rice pathogens.

Sci Rep. 2015 Aug 13;5:12975. doi: 10.1038/srep12975;PMID:26268540

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735