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fadN

3-hydroxyacyl-CoA dehydrogenase
genefadN
locusRBAM_029920
feature typeCDS
productABS75323.1 3-hydroxyacyl-CoA dehydrogenase
synonymsyusL
homologBSU32840
start3108711
stop3111080
direction-
length2370
essentialno
protein detected in LB
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1Lipid metabolism
Subcategory2Utilization of lipids
Subcategory3Utilization of fatty acids

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
fadM-fadN-fadA-fadE
Transcripts
Primary TSS3111145
Secondary TSS
Internal TSS
Antisense TSS3110149

Sigma factors

SigA

Protein regulator

CcpA repression FadR repression FadR repression PtsH repression SdpR activation SdpR activation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SdpR Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
1.1.1.35
Protein family
Domains
Effectors of protein activity
Refer to BSU32840
Structure
Refer to BSU32840
Malonylation
"K116,143,247,267,272,329,337,347,469,783"
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735