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fapR

transcription factor FapR
genefapR
locusRBAM_015710
feature typeCDS
productABS73934.1 transcription factor FapR
synonymsylpC
homologBSU15880
start1577045
stop1577611
direction+
length567
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1Lipid metabolism
Subcategory2Biosynthesis of lipids
Subcategory3Biosynthesis of fatty acids

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
fapR-plsX-fabD-fabG-acpA
Transcripts
Primary TSS1577003
Secondary TSS
Internal TSS1577262
Antisense TSS

Sigma factors

SigA

Protein regulator

ComA activation FapR repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU15880
Structure
Refer to BSU15880
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735