Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


fapR

transcription factor
genefapR
producttranscription factor
locusRBAM_015710
synonymsylpC
homologBSU15880
start1577039
stop1577605
direction+
length567
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

Category2. Metabolism
Subcategory12.4. Lipid metabolism
Subcategory22.4.2. Biosynthesis of lipids
Subcategory32.4.2.1. Biosynthesis of fatty acids

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
fapR-plsX-fabD-fabG-acpA
Transcripts
Primary TSS1577003
Secondary TSS
Internal TSS1577262
Antisense TSS

Sigma factors

SigA

Protein regulator

ComA activation FapR repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU15880
Structure
Refer to BSU15880
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735