Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


gapB

glyceraldehyde-3-phosphate dehydrogenase
genegapB
productglyceraldehyde-3-phosphate dehydrogenase
locusRBAM_026060
synonymsppc
homologBSU29020
start2729683
stop2730705
direction-
length1023
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

Category2. Metabolism
Subcategory12.2. Carbon metabolism
Subcategory22.2.1. Carbon core metabolism
Subcategory32.2.1.2. Gluconeogenesis

Phenotypes of a mutant

plant-bacteria interaction

transcripton stimulated by root exudate

Expression and Regulation

Operons
gapB-speD
Transcripts
Primary TSS2730752
Secondary TSS2730812
Internal TSS2730136
Antisense TSS2729605

Sigma factors

SigA

Protein regulator

CcpN repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

CcpN Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
1.2.1.59
Protein family
Domains
Effectors of protein activity
Refer to BSU29020
Structure
Refer to BSU29020
Modification
"K105,193"
Acetylation
K335
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42.

PLoS One. 2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002. eCollection 2015. PMID: 26540162