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icd

NADP-dependent isocitrate dehydrogenase
geneicd
locusRBAM_026170
feature typeCDS
productABS74975.1 NADP-dependent isocitrate dehydrogenase
synonymscitC
homologBSU29130
start2742398
stop2743669
direction-
length1272
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1carbon metabolism
Subcategory2carbon core metabolism
Subcategory3TCA cycle

Phenotypes of a mutant

plant-bacteria interaction

Expression and Regulation

Operons
citZ-icd-mdh
Transcripts
Primary TSS2743829
Secondary TSS2743750
Internal TSS2743450
Antisense TSS

Sigma factors

SigA SigA

Protein regulator

CcpA repression CcpA repression CcpC repression CcpC repression CitB mRNA destabilization

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
1.1.1.42
Protein family
Domains
Effectors of protein activity
Refer to BSU29130
Structure
Refer to BSU29130
Malonylation
"K48,70,91,226,260,268"
Acetylation
"K48,66,158,226,233,247,393"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828