gene | iolC |
locus | RBAM_036760 |
feature type | CDS |
product | ABS76005.1 5-dehydro-2-deoxygluconokinase |
synonyms | yxdC |
homolog | BSU39740 |
start | 3782744 |
stop | 3783736 |
direction | - |
length | 993 |
essential | no |
protein detected in LB | not detected |
Functional category containing this gene/protein
Category | Metabolism |
Subcategory1 | Carbon metabolism |
Subcategory2 | Utilization of specific carbon |
Subcategory3 | Utilization of inositol |
Phenotypes of a mutant
plant-bacteria interaction
transcription stimulated by root exudate |
Expression and Regulation
iolA-iolB-iolC-iolD-iolE-iolF- |
Primary TSS | |
Secondary TSS | |
Internal TSS | |
Antisense TSS |
Sigma factors
SigA |
Protein regulator
CcpA repression IolR repression |
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
SigA Regulon |
2.7.1.92 |
https://enzyme.expas |
Refer to BSU39740 |
Refer to BSU39740 |
K2 |
Biological materials
no ortholog in B. subtilis 168 |
References
Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.
J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,
Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates
BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X
Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings
BMC Microbiology (2015) 15:21