gene | lacR1 |
locus | RBAM_012200 |
feature type | CDS |
product | ABS73583.1 HAD family phosphatase |
synonyms | |
homolog | BSU33910 |
start | 1189458 |
stop | 1190141 |
direction | + |
length | 684 |
essential | |
protein detected in LB | not detected |
Functional category containing this gene/protein
Category | Metabolism |
Subcategory1 | carbon metabolism |
Subcategory2 | utilization of specific carbon sources |
Subcategory3 | utilization of galactan |
Phenotypes of a mutant
plant-bacteria interaction
"utilization of plant polysaccharides, transcription stimulated by root exudate" |
Expression and Regulation
Refer to BSU34170 |
Primary TSS | |
Secondary TSS | |
Internal TSS | |
Antisense TSS | 1188918 |
Sigma factors
Protein regulator
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
Refer to BSU34170 |
Refer to BSU34170 |
Biological materials
no ortholog in B. subtilis 168 |
References
Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.
J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,
Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates
BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735Chen XH, Koumoutsi A, Scholz R, Eisenreich A, Sch
Nat Biotechnol. 2007 Sep;25(9):1007-14. Epub 2007 Aug 19.;PMID:17704766