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ndoA

RNase EndoA, MazF family toxin, UACAU-specific mRNA interferase
genendoA
productRNase EndoA, MazF family toxin, UACAU-specific mRNA interferase
locusRBAM_005000
synonymsydcE
homologBSU04660
start493297
stop493647
direction+
length351
essential
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1RNA synthesis and degradation
Subcategory2RNases
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ndoAI-ndoA
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU04660
Structure
Refer to BSU04660
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735