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ndoAI

antitoxin, antagonist for EndoA
genendoAI
productantitoxin, antagonist for EndoA
locusRBAM_004990
synonymsydcD
homologBSU04650
start493010
stop493291
direction+
length282
essential
Genomic Context

Functional containing this gene/protein

CategoryLifestyles
Subcategory1coping with stress
Subcategory2"toxins, antitoxins and immunity against toxins"
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ndoAI-ndoA
Transcripts
Primary TSS492961
Secondary TSS492854
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU04650
Structure
Refer to BSU04650
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42.

PLoS One. 2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002. eCollection 2015. PMID: 26540162