Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


pdhB

pyruvate dehydrogenase (E1 beta subunit)
genepdhB
productpyruvate dehydrogenase (E1 beta subunit)
locusRBAM_014430
synonyms
homologBSU14590
start1446684
stop1447661
direction+
length978
essentialno
Genomic Context

Functional containing this gene/protein

CategoryMetabolism
Subcategory1carbon metabolism
Subcategory2carbon core metabolism
Subcategory3TCA cycle

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings

Expression and Regulation

Operons
pdhA-pdhB-pdhC-pdhD
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS1447070

Sigma factors

SigA

Protein regulator

Additional regulation

"stringent response, negative regulation"

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
1.2.4.1
Protein family
Domains
Effectors of protein activity
Refer to BSU14590
Structure
Refer to BSU14590
Modification
K46
Acetylation
"K46,155,175"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.2.4 suppression by plant seedlings

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21