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pyrF

orotidine 5-phosphate decarboxylase
genepyrF
productorotidine 5-phosphate decarboxylase
locusRBAM_015380
synonyms
homologBSU15550
start1543367
stop1544083
direction+
length717
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryMetabolism
Subcategory1nucleotide metabolism
Subcategory2biosynthesis/ acquisition of nucleotides
Subcategory3biosynthesis/ acquisition of pyrimidine nucleotide

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by root exudate

Expression and Regulation

Operons
pyrR-pyrP-pyrB-pyrC-pyrAA-pyrA
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

SigA

Protein regulator

PyrR termination/ antitermination

Additional regulation

RNA regulation_mode

"PyrR, RNA switch"

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
4.1.1.23
Protein family
Domains
Effectors of protein activity
Refer to BSU15550
Structure
Refer to BSU15550
Modification
Acetylation
K137
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735