Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


rapA

tetratricopeptide repeat protein
generapA
locusRBAM_012450
feature typeCDS
productABS73608.2 tetratricopeptide repeat protein
synonymsgsiAA
homologBSU12430
start1215906
stop1217042
direction+
length1131
essential
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1"Protein synthesis, modification and degradation"
Subcategory2Protein modification
Subcategory3Protein phosphatases

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
rapA-phrA
Transcripts
Primary TSS1215875
Secondary TSS1215877
Internal TSS
Antisense TSS

Sigma factors

SigA

Protein regulator

CcpA repression CodY repression ComA activation Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

Spo0A Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU12430
Structure
Refer to BSU12430
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735