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rapD

tetratricopeptide repeat protein
generapD
locusRBAM_033580
feature typeCDS
productABS75687.1 tetratricopeptide repeat protein
synonymsywpA
homologBSU36380
start3475289
stop3476353
direction+
length1065
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1genetics
Subcategory2genetic competence
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

Expression and Regulation

Operons
Refer to BSU36380
Transcripts
Primary TSS3475253
Secondary TSS3474985
Internal TSS3476151
Antisense TSS3475545

Sigma factors

SigA SigM SigX

Protein regulator

RghR repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigM Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU36380
Structure
Refer to BSU36380
Malonylation
K78
Acetylation
K78
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828