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ricA

master regulator for biofilm formation
genericA
locus (old tag)RBAM_RS08420 (RBAM_016860)
feature typeCDS_with protein
productWP_003154113.1; hypothetical protein
synonymsymcA
homologBSU17020
start1692954
stop1693385
direction+
length432
essentialno
protein detection in LByes
Genomic Context

Functional category containing this gene/protein

Category4. Lifestyles
Subcategory14. 4 Interaction with plants and growth competitor
Subcategory24.4.3 Response to plants
Subcategory34.4.3.1 transcriptomics

Phenotypes of a mutant

plant-bacteria interaction

stimulated by root exudate, suppression by plant seedlings

Expression and Regulation

Operons
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Structure
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Branda SS1, Gonz?lez-Pastor JE, Dervyn E, Ehrlich

Genes involved in formation of structured multicellular communities by Bacillus subtilis

J Bacteriol. 2004 Jun;186(12):3970-9.