Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


rnjA

ribonuclease J1
genernjA
productribonuclease J1
locusRBAM_014270
synonymsykqC
homologBSU14530
start1386599
stop1388266
direction-
length1668
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

Category3. Information processing
Subcategory13.2. RNA synthesis and degradation
Subcategory23.2.4. RNases
Subcategory33.2.4.1. Exoribonucleases

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ykqC-ykzG
Transcripts
Primary TSS
Secondary TSS
Internal TSS1388242
Antisense TSS1387869

Sigma factors

SigA

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU14530
Structure
Refer to BSU14530
Modification
Acetylation
"K129,153,166"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735