gene | rnjA |
locus | RBAM_014270 |
feature type | CDS |
product | ABS73790.1 ribonuclease J |
synonyms | ykqC |
homolog | BSU14530 |
start | 1386602 |
stop | 1388269 |
direction | - |
length | 1668 |
essential | no |
protein detected in LB | yes |
Functional category containing this gene/protein
Category | Information processing |
Subcategory1 | RNA synthesis and degradation |
Subcategory2 | RNAses |
Subcategory3 | Exoribonucleases |
Phenotypes of a mutant
plant-bacteria interaction
transcription stimulated by root exudate |
Expression and Regulation
ykqC-ykzG |
Primary TSS | |
Secondary TSS | |
Internal TSS | 1388242 |
Antisense TSS | 1387869 |
Sigma factors
SigA |
Protein regulator
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
SigA Regulon |
Refer to BSU14530 |
Refer to BSU14530 |
"K129,153,166" |
Biological materials
References
Liu L, Wang G, Song L, Lv B, Liang W
Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,
Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates
BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735