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rocE

arginine/ornithine/gamma-aminobutyrate permease
generocE
productarginine/ornithine/gamma-aminobutyrate permease
locusRBAM_037240
synonyms
homologBSU40330
start3832442
stop3833842
direction-
length1401
essential
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

Category2. Metabolism
Subcategory12.3. Amino acid/ nitrogen metabolism
Subcategory22.3.1. Biosynthesis/ acquisition of amino acids
Subcategory32.3.1.4. Biosynthesis/ acquisition of arginine

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
rocD-rocE-rocF
Transcripts
Primary TSS3833959
Secondary TSS
Internal TSS3833216
Antisense TSS

Sigma factors

SigL

Protein regulator

AhrC activation CodY repression RocR activation Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigL Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU40330
Structure
Refer to BSU40330
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735