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rocE

amino acid permease
generocE
locusRBAM_037240
feature type
product
synonyms
homologBSU40330
start3832449
stop3833849
direction-
length1401
essential
protein detected in LB
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1Amino acid/ nitrogen metabolism
Subcategory2Biosynthesis/ acquisition of a
Subcategory3Biosynthesis/ acquisition of arginine

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
rocD-rocE-rocF
Transcripts
Primary TSS3833959
Secondary TSS
Internal TSS3833216
Antisense TSS

Sigma factors

SigL

Protein regulator

AhrC activation CodY repression RocR activation Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigL Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU40330
Structure
Refer to BSU40330
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
"4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.3 suppression by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735