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rplU

ribosomal protein L21 (BL20)
generplU
productribosomal protein L21 (BL20)
locusRBAM_025010
synonyms
homologBSU27960
start2620014
stop2620322
direction-
length309
essentialyes
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1"protein synthesis, modification and degradation"
Subcategory2translation
Subcategory3ribosomal proteins

Phenotypes of a mutant

plant-bacteria interaction

transcription (RNA synthesis) stimulated by root exudate

Expression and Regulation

Operons
spoIVFA-spoIVFB-rplU-prp-rpmA
Transcripts
Primary TSS2620424
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

"stringent response, negative regulation"

RNA regulation_mode

This gene is a member of the following regulons

stringent response
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU27960
Structure
Refer to BSU27960
Modification
Acetylation
"K6,94,99"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42.

PLoS One. 2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002. eCollection 2015. PMID: 26540162