Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


scoC

transcriptional regulator of extracellular protease production and sporulation (MarR family)
genescoC
producttranscriptional regulator of extracellular protease production and sporulation (MarR family)
locusRBAM_010230
synonymshpr
homologBSU09990
start1000642
stop1001253
direction-
length612
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transcription factors and their control
Subcategory3transcription factors/ other

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU09990
Transcripts
Primary TSS1001283
Secondary TSS
Internal TSS1001224
Antisense TSS

Sigma factors

SigA

Protein regulator

AbrB activation CodY negative regulation SalA negative regulation SenS positive regulation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU09990
Structure
Refer to BSU09990
Modification
Acetylation
K29
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735