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sigA

RNA polymerase major sigma-43 factor (sigma-A)
genesigA
productRNA polymerase major sigma-43 factor (sigma-A)
locusRBAM_023510
synonymsrpoD
homologBSU25200
start2469740
stop2470861
direction-
length1122
essential
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1RNA synthesis and degradation
Subcategory2transcription
Subcategory3sigma factors

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings

Expression and Regulation

Operons
yqxD-dnaG-sigA
Transcripts
Primary TSS2471027
Secondary TSS2471158
Internal TSS
Antisense TSS2469683

Sigma factors

SigA SigA SigD SigH

Protein regulator

Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

Spo0A Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU25200
Structure
Refer to BSU25200
Modification
"K109,153,339,354"
Acetylation
"K109,179,223"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.2.4 suppression by plant seedlings

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21