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sigW

RNA polymerase ECF-type sigma factor SigW, required for the adaptation to membrane active agents, activated by alkaline shock and by polymyxin B, vancomycin, cephalosporin C, D-cycloserine, and trito
genesigW
productRNA polymerase ECF-type sigma factor SigW, required for the adaptation to membrane active agents, activated by alkaline shock and by polymyxin B, vancomycin, cephalosporin C, D-cycloserine, and trito
locusRBAM_002260
synonymsybbL
homologBSU01730
start198702
stop199265
direction+
length564
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1RNA synthesis and degradation
Subcategory2transcription
Subcategory3sigma factors

Phenotypes of a mutant

plant-bacteria interaction

stimulated by root exudate

Expression and Regulation

Operons
sigW-rsiW
Transcripts
Primary TSS198628
Secondary TSS198436
Internal TSS
Antisense TSS

Sigma factors

SigW

Protein regulator

AbrB repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigW Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU01730
Structure
Refer to BSU01730
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735