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speA

aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
genespeA
locusRBAM_014490
feature typeCDS
productABS73812.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
synonyms
homologBSU14630
start1452285
stop1453757
direction-
length1473
essential
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1additional metabolic pathways
Subcategory2miscellaneous metabolic pathways
Subcategory3metabolism of polyamines

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by rice seedlings

Expression and Regulation

Operons
Refer to BSU14630
Transcripts
Primary TSS1453782
Secondary TSS
Internal TSS1452704
Antisense TSS1453393

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU14630
Structure
Refer to BSU14630
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
"4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate, no ortholog in B. subtilis 168"

References


Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21