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spoIIID

transcriptional regulator
genespoIIID
producttranscriptional regulator
locusRBAM_033620
synonyms
homologBSU36420
start3479351
stop3479632
direction-
length282
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transcription factors and their control
Subcategory3transcription factors/ other

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by root exudate

Expression and Regulation

Operons
usd-spoIIID-mbl
Transcripts
Primary TSS3479794
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

SigE

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigE Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU36420
Structure
Refer to BSU36420
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.4 suppression by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735