Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


sucD

succinate--CoA ligase subunit alpha SucD
genesucD
locusRBAM_015930
feature type4. 4 Interaction with plants and growth
product4.4.3.1 transcriptomics
synonyms
homologBSU16100
start1596902
stop1597804
direction+
length903
essentialno
protein detected in LB4.4.3 Response to plants
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1electron transport and ATP synthesis
Subcategory2ATP synthesis
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

"4. Lifestyles,"

Expression and Regulation

Operons
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
6.2.1.5
Protein family
https://enzyme.expas
Domains
Effectors of protein activity
Structure
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
"4. Lifestyles

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735