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yabR

similar to polyribonucleotide nucleotidyltransferase
geneyabR
productsimilar to polyribonucleotide nucleotidyltransferase
locusRBAM_000720
synonyms
homologBSU00630
start70325
stop70711
direction+
length387
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryLifestyles
Subcategory1sporulation
Subcategory2sporulation proteins
Subcategory3sporulation proteins/ other

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
yabM-yabN-yabO-yabP-yabQ-divIC
Transcripts
Primary TSS70285
Secondary TSS
Internal TSS70645
Antisense TSS

Sigma factors

SigD SigE SigM SigW

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigM Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU00630
Structure
Refer to BSU00630
Modification
"K8,59,65,103"
Acetylation
K103
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735