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ydaE

D-lyxose/D-mannose family sugar isomerase
geneydaE
locusRBAM_004420
feature typeCDS
productABS72841.1 D-lyxose/D-mannose family sugar isomerase
synonyms
homologBSU04200
start440839
stop441342
direction+
length504
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryMetabolism
Subcategory1carbon metabolism
Subcategory2utilization of specific carbon sources
Subcategory3utilization of other pentoses and hexoses

Phenotypes of a mutant

plant-bacteria interaction

Expression and Regulation

Operons
ydaD-ydaE-ydaF-ydaG
Transcripts
Primary TSS317069
Secondary TSS
Internal TSS440879
Antisense TSS440972

Sigma factors

SigB

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigB Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU04200
Structure
Refer to BSU04200
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42

PLoS One.?2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002;PMID: 26540162

Fan B, Li L, Chao Y, F?rstner K, Vogel J, Borriss

dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42

PLoS One.?2015 Nov 5;10(11):e0142002. doi: 10.1371/journal.pone.0142002;PMID: 26540162