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ydbM

putative acyl-CoA dehydrogenase
geneydbM
locus (old tag)RBAM_RS02430 (RBAM_004850)
feature typeCDS_with protein
productWP_023356723.1; acyl-CoA dehydrogenase
synonyms
homologBSU04520
start479921
stop481066
direction+
length1107
essentialno
protein detection in LByes
Genomic Context

Functional category containing this gene/protein

CategoryGroups of genes
Subcategory1poorly characterized/ putative enzymes
Subcategory2NA
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
Refer to BSU04520
Transcripts
Primary TSS479767
Secondary TSS479889
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

CymR repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

CymR Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU04520
Structure
Refer to BSU04520
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735