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ykaA

DUF47 domain-containing protein
geneykaA
locusRBAM_012700
feature typeCDS
productABS73633.1 DUF47 domain-containing protein
synonyms
homologBSU12850
start1230289
stop1230906
direction-
length618
essentialno
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryGroups of genes
Subcategory1proteins of unknown function
Subcategory2NA
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by rice seedlings

Expression and Regulation

Operons
ykaA-pit
Transcripts
Primary TSS1230943
Secondary TSS1231097
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Spo0A repression

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

Spo0A Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU12850
Structure
Refer to BSU12850
Malonylation
"K61,65"
Acetylation
"K39,46,61"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
no ortholog in B. subtilis 168

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21