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ymfH

putative processing protease
geneymfH
productputative processing protease
locusRBAM_016710
synonyms
homologBSU16860
start1676888
stop1678174
direction+
length1287
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryGroups of genes
Subcategory1poorly characterized/ putative enzymes
Subcategory2NA
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by root exudate and rice seedlings

Expression and Regulation

Operons
ymfD-ymfF-ymfH
Transcripts
Primary TSS1676850
Secondary TSS
Internal TSS1677335
Antisense TSS

Sigma factors

Protein regulator

Mta activation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

Mta Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU16860
Structure
Refer to BSU16860
Modification
Acetylation
"K35,252"
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.3 suppression by root exudate

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21