gene | yrkD |
locus | RBAM_005420 |
feature type | |
product | |
synonyms | |
homolog | BSU26550 |
start | 523351 |
stop | 523611 |
direction | + |
length | 261 |
essential | no |
protein detected in LB |
Functional category containing this gene/protein
Category | Groups of genes |
Subcategory1 | proteins of unknown function |
Subcategory2 | NA |
Subcategory3 |
Phenotypes of a mutant
plant-bacteria interaction
transcription repressed by root exudate |
Expression and Regulation
Refer to BSU26550 |
Primary TSS | 523250 |
Secondary TSS | |
Internal TSS | |
Antisense TSS |
Sigma factors
Protein regulator
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
Refer to BSU26550 |
Refer to BSU26550 |
K6 |
Biological materials
"4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.3 suppression by root exudate |
References
Liu L, Wang G, Song L, Lv B, Liang W
Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828Fan, B., et al.,
Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates. BMC Microbiol, 2012. 12: p. 116.
BMC Microbiol, 2012. 12: p. 116.