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ysdB

conserved hypothetical protein
geneysdB
productconserved hypothetical protein
locusRBAM_025890
synonyms
homologBSU28830
start2714947
stop2715339
direction+
length393
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2sigma factors and their control
Subcategory3control of sigma factors

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings

Expression and Regulation

Operons
Refer to BSU28830
Transcripts
Primary TSS2714913
Secondary TSS2714858
Internal TSS
Antisense TSS

Sigma factors

SigB SigW

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

SigW Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU28830
Structure
Refer to BSU28830
Modification
Acetylation
K67
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.2.4 suppression by plant seedlings

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21