Home Categories Regulon list Genes not in 168 Interaction with Plants Reference Resourses
Login


ysdB

sigma-w pathway protein ysdB
geneysdB
locusRBAM_025890
feature typeCDS
productABS74947.1 sigma-w pathway protein ysdB
synonyms
homologBSU28830
start2714952
stop2715344
direction+
length393
essentialno
protein detected in LByes
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2sigma factors and their control
Subcategory3control of sigma factors

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by rice seedlings

Expression and Regulation

Operons
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Structure
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
1.2.1.1.1. Uptake of carbon sources

References


Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21