| gene | ytrD |
| locus | RBAM_027360 |
| feature type | CDS |
| product | ABS75094.1 ABC transporter permease |
| synonyms | |
| homolog | BSU30430 |
| start | 2863402 |
| stop | 2864382 |
| direction | - |
| length | 981 |
| essential | |
| protein detected in LB | yes |
Functional category containing this gene/protein
| Category | Cellular processes |
| Subcategory1 | transporters |
| Subcategory2 | ABC transporters |
| Subcategory3 |
Phenotypes of a mutant
plant-bacteria interaction
Expression and Regulation
| ytrG-ytrA-ytrB-ytrC-ytrD-ytrE- |
| Primary TSS | |
| Secondary TSS | |
| Internal TSS | |
| Antisense TSS | 2864306 |
Sigma factors
| SigA |
Protein regulator
| YtrA repression |
Additional regulation
RNA regulation_mode
This gene is a member of the following regulons
| SigA Regulon |
| Refer to BSU30430 |
| Refer to BSU30430 |
Biological materials
| "BlrA (formerly YtvA) related to plant phototropins, coupled to a transcriptional complex that monitors the presence of light in the environment. Besides being sensitive to light, this receptor senses the presence of oxygen (Losi et al., 2002). It carries a LOV (light, oxygen and voltage) domain and a STAS (sulphate transporters and antisigma??actor antagonists) domain and binds FMN (flavin mononucleotide) as a chromophore. Its cycle of activation by light/recovery is also tuned to the environment by features such as hydration (Pennacchietti et al., 2014). " |
References