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yybE

LysR family transcriptional regulator
geneyybE
locusRBAM_037740
feature typeCDS
productABS76099.1 LysR family transcriptional regulator
synonyms
homologBSU40670
start3880072
stop3880962
direction-
length891
essentialno
protein detected in LBnot detected
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1regulation of gene expression
Subcategory2transcription factors and their control
Subcategory3transcription factor/ other/ based on similarity

Phenotypes of a mutant

plant-bacteria interaction

transcription repressed by root exudate

Expression and Regulation

Operons
yybE-yybD-yybC
Transcripts
Primary TSS
Secondary TSS
Internal TSS
Antisense TSS

Sigma factors

Protein regulator

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU40670
Structure
Refer to BSU40670
Malonylation
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information

References


Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735