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lipC

spore coat protein, phospholipase implicated in spore germination
genelipC
locus (old tag)RBAM_RS02175 (RBAM_004340)
feature typeCDS_with protein
productWP_012116824.1; germination protein
synonymsycsK
homologBSU04110
start431167
stop431808
direction+
length642
essentialno
protein detection in LByes
Genomic Context

Functional category containing this gene/protein

Category2. Metabolism
Subcategory12.4. Lipid metabolism
Subcategory22.4.1. Utilization of lipids
Subcategory32.4.1.1. Utilization of phospholipids

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
ycsF-ycsG-ycsI-kipI-kipA-kipR-
Transcripts
Primary TSS431139
Secondary TSS
Internal TSS431512
Antisense TSS431219

Sigma factors

SpoIVCB

Protein regulator

GerE activation KipR repression KipR repression TnrA activation TnrA activation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

GerE Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU04110
Structure
Refer to BSU04110
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B et al.

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates.

BMC Microbiol, 2012. 12: p. 116.