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rapF

response regulator aspartate phosphatase
generapF
productresponse regulator aspartate phosphatase
locusRBAM_034530
synonymsywhJ
homologBSU37460
start3566350
stop3567495
direction+
length1146
essentialno
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1genetics
Subcategory2genetic competence
Subcategory3

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by rice seedlings

Expression and Regulation

Operons
rapF-phrF
Transcripts
Primary TSS3566330
Secondary TSS3566318
Internal TSS3567392
Antisense TSS

Sigma factors

SigH

Protein regulator

CcpA repression ComA activation

Additional regulation

RNA regulation_mode

This gene is a member of the following regulons

ComA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
Protein family
Domains
Effectors of protein activity
Refer to BSU37460
Structure
Refer to BSU37460
Modification
Acetylation
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.2 stimulation by plant seedlings

References


Xie S, Wu H, Chen L, Zang H, Xie Y, Gao X

Transcriptome profiling of Bacillus subtilis OKB105 in response to rice seedlings

BMC Microbiology (2015) 15:21