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rpoC

DNA-directed RNA polymerase subunit beta
generpoC
locusRBAM_001330
feature type4. 4 Interaction with plants and growth
product4.4.3.1 transcriptomics
synonyms
homologBSU01080
start126279
stop129878
direction+
length3600
essentialyes
protein detected in LB4.4.3 Response to plants
Genomic Context

Functional category containing this gene/protein

CategoryInformation processing
Subcategory1RNA synthesis and degradation
Subcategory2transcription
Subcategory3RNA polymerase

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
rpoB-rpoC
Transcripts
Primary TSS
Secondary TSS
Internal TSS126526
Antisense TSS126327

Sigma factors

SigA

Protein regulator

Additional regulation

"stringent response, negative regulation"

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
2.7.7.6
Protein family
https://enzyme.expas
Domains
Effectors of protein activity
Refer to BSU01080
Structure
Refer to BSU01080
Malonylation
"K71,153,192"
Acetylation
"K43,56,64,71,153,161,192,196,351,372,384,589,598,
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
"4. Lifestyles

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735