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rpoC

RNA polymerase beta subunit
generpoC
productRNA polymerase beta subunit
locusRBAM_001330
synonyms
homologBSU01080
start126279
stop129878
direction+
length3600
essentialyes
Expressed protein
Standard condition
Genomic Context

Functional containing this gene/protein

CategoryInformation processing
Subcategory1RNA synthesis and degradation
Subcategory2transcription
Subcategory3R#N/A polymerase

Phenotypes of a mutant

plant-bacteria interaction

transcription stimulated by root exudate

Expression and Regulation

Operons
rpoB-rpoC
Transcripts
Primary TSS
Secondary TSS
Internal TSS126526
Antisense TSS126327

Sigma factors

SigA

Protein regulator

Additional regulation

"stringent response, negative regulation"

RNA regulation_mode

This gene is a member of the following regulons

SigA Regulon
The protein


Catalyzed reaction/ biological activity
E.C. number
2.7.7.6
Protein family
Domains
Effectors of protein activity
Refer to BSU01080
Structure
Refer to BSU01080
Modification
"K71,153,192"
Acetylation
"K43,56,64,71,153,161,192,196,351,372,384,589,598,
Localization

Biological materials


Mutant
LacZ fusion
GFP fusion
FLAG-tag construct
Antibody
Additional information
4. Lifestyles 4. 4 Interaction with plants and growth competitors 4.4.3 Response to plants 4.4.3.1 transcriptomics 4.4.3.1.1 stimulation by root exudate

References


Fan B, Li Y, Li L, P X,Bu C,Wu X, Borriss R.

Malonylome analysis of rhizobacterium Bacillus amyloliquefaciens FZB42 reveals involvement of lysine malonylation in polyketide synthesis and plant-bacteria interactions

J Proteomics. 2017 Feb 10;154:1-12. doi: 10.1016/j.jprot.2016.11.022;PMID:27939684

Liu L, Wang G, Song L, Lv B, Liang W

Acetylome analysis reveals the involvement of lysine acetylation in biosynthesis of antibiotics in Bacillus amyloliquefaciens.

Sci Rep. 2016 Jan 29;6:20108. doi: 10.1038/srep20108;PMID:26822828

Fan B, Carvalhais, LC, Becker, A, Fedoseyenko D,

Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates

BMC Microbiol. 2012 Jun 21;12:116. doi: 10.1186/1471-2180-12-116.;PMID:22720735